NiWrap

Modern Neuroimaging Made Simple

Neuroimaging tools for modern workflows

Use neuroimaging tools directly from Python, TypeScript, or R with IDE autocompletion, type checking, and structured outputs.

1500 tools
10 packages
2 languages

Core Projects

The tools and platforms powering NiWrap

NiWrap Logo

NiWrap Packages

Type-safe Python, TypeScript, and R packages providing programmatic access to neuroimaging tools. Get full IDE autocompletion, type checking, and structured outputs for seamless pipeline creation.

FSL ANTs AFNI FreeSurfer MRTrix3 +7 more
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NiWrap Hub

Interactive web platform for exploring neuroimaging tools. Browse available tools, configure them through auto-generated GUIs, and generate ready-to-use code for your pipelines.

Code Generation Interactive GUIs Tool Discovery
Styx Logo

Styx Compiler

The engine behind NiWrap. Generates type-safe bindings from CLI tool descriptions. Define a tool once, get Python, TypeScript, and R bindings with full IDE support.

Code Generation Multi-Language Type Safety